Frequency that each TF appears in the top 8 factors for each conversion to H9 Embryonic Stem cells

These are the factors that are most commonly predicted for H9 Embryonic Stem cells. This is meant as an illustation only and are not recommended as the key TFs for a conversion.

Transcription factors for over expression

TF name Frequency
POU5F1 454
NANOG 453
SOX2 438
TCF7L1 423
NFYB 402
RBPJ 360
SMARCA5 225
CCNA2 203
TCF3 195
MYC 118
FOXD3 100
NCOR1 98
ATF5 27
SMAD4 22
JUND 22
CEBPB 20
PBX1 14
HMGA1 12
ZIC3 8
TCF4 6
SPIB 6
EGR1 5
FOSL1 5
SMARCA1 5
ZFP42 3
MEF2B 3
KLF4 3
FOXH1 3
FOXO1 3
FOS 2
MLF1IP 2
UTF1 2
SIRT1 1
CDK7 1
PARP1 1