Mogrify

Predictions for conversion between dermal fibroblast and H9 Embryonic Stem cells

There are 6 dermal fibroblast samples and 3 H9 Embryonic Stem cells samples in the database. The results below show the best set of transcription factors predicted by mogrify which can provide 95% regulatory converage of the required genes.

If you are interested in this conversion click here to consult the complete list where you can limit the number of clones available or experiment with other combinations or set sizes.

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Transcription factors for over expression.

TF name
NANOG ncbi pubmed
SOX2 ncbi pubmed
POU5F1 ncbi pubmed
TCF7L1 ncbi pubmed
FOXD3 ncbi pubmed
FOXO1 ncbi pubmed
SMARCA1 ncbi pubmed
NFYB ncbi pubmed

The TFs highlighted in red are not required to reach 95% coverage of the required genes.

MARA STRING
Created with Highcharts 9.0.1TFsCoverageChart context menuCumulative coverage of regulationPercentage of Coverage0255075100Highcharts.com

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